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Knowledge BaseTroubleshooting Atlas › Tissue processing

Cross-contamination (floaters) between cases

Also known as: floaters, case contamination

What it looks like

Presence of unwanted tissue fragments or artifacts on the slide or block. This can obscure diagnostic features or lead to misinterpretation.

Where it usually appears: Typically observed during microscopic examination of slides or when preparing blocks for sectioning.

Likely causes
  • Insufficient cleaning of instruments between cases
  • Improper handling during embedding
  • Inadequate separation of samples in processing cassettes
  • Use of contaminated reagents
Immediate checks
  • Inspect instruments for residual tissue
  • Review embedding techniques for potential mishandling
  • Check for proper labeling and separation of cassettes
Corrective action
  • Thoroughly clean all instruments and equipment used
  • Re-embed affected samples if contamination is confirmed
  • Re-evaluate processing protocols for potential improvements
Preventive action
  • Implement strict cleaning protocols between cases
  • Use dedicated instruments for each case when possible
  • Train staff on proper handling and embedding techniques
Equipment: Embedding center, microtomeReagent: Embedding mediaRelated SOP: Tissue Processing SOP

This atlas is for educational purposes for laboratory professionals. It does not replace your institutional SOPs, manufacturer instructions, validated protocols or pathologist judgment. Adapt any action to your laboratory and equipment.

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